Construct: shRNA TRCN0000123598
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_001029979.1-513s1c1
- DNA Barcode:
- CCTGGAGGAAGATTCCAGATA
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Safb2 (224902)
- Gene Description:
- scaffold attachment factor B2
- Transcript:
- RefSeq NM_001029979.1 (NON-CURRENT)
- Match location:
- Position 513 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000123598)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CCTGGAGGAAGATTCCAGATA
- Hairpin Sequence:
-
5'-CCGG-CCTGGAGGAAGATTCCAGATA-CTCGAG-TATCTGGAATCTTCCTCCAGG-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCCTGGAGGAAGATTCCAGATACTCGAGTATCTGGAATCTTCCTCCAGGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACCTGGAGGAAGATTCCAGATACTCGAGTATCTGGAATCTTCCTCCAGG-3'
Other clones with same target sequence:
(none)
