Construct: shRNA TRCN0000123913

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_028007.1-308s1c1
DNA Barcode:
CCTGAAGACTTTGAGTGCGTT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Itfg1 (71927)
Gene Description:
integrin alpha FG-GAP repeat containing 1
Transcript:
RefSeq NM_028007.1 (NON-CURRENT)
Match location:
Position 308 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000123913)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCTGAAGACTTTGAGTGCGTT
Hairpin Sequence:
5'-CCGG-CCTGAAGACTTTGAGTGCGTT-CTCGAG-AACGCACTCAAAGTCTTCAGG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCTGAAGACTTTGAGTGCGTTCTCGAGAACGCACTCAAAGTCTTCAGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCTGAAGACTTTGAGTGCGTTCTCGAGAACGCACTCAAAGTCTTCAGG-3'

Other clones with same target sequence:

(none)