Construct: shRNA TRCN0000124164

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_029945.1-2699s1c1
DNA Barcode:
GCAGTGGTGGAGTTATTCAAA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Smpd4 (77626)
Gene Description:
sphingomyelin phosphodiesterase 4
Transcript:
RefSeq NM_029945.1 (NON-CURRENT)
Match location:
Position 2699 (3UTR)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000124164)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCAGTGGTGGAGTTATTCAAA
Hairpin Sequence:
5'-CCGG-GCAGTGGTGGAGTTATTCAAA-CTCGAG-TTTGAATAACTCCACCACTGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCAGTGGTGGAGTTATTCAAACTCGAGTTTGAATAACTCCACCACTGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCAGTGGTGGAGTTATTCAAACTCGAGTTTGAATAACTCCACCACTGC-3'

Other clones with same target sequence:

  1. TRCN0000302442