Construct: shRNA TRCN0000124206

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_016926.1-2029s1c1
DNA Barcode:
CGATAGATGTTGGTCCTCCTT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Sart3 (53890)
Gene Description:
squamous cell carcinoma antigen recognized by T cells 3
Transcript:
RefSeq NM_016926.1 (CURRENT)
Match location:
Position 2029 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000124206)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CGATAGATGTTGGTCCTCCTT
Hairpin Sequence:
5'-CCGG-CGATAGATGTTGGTCCTCCTT-CTCGAG-AAGGAGGACCAACATCTATCG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCGATAGATGTTGGTCCTCCTTCTCGAGAAGGAGGACCAACATCTATCGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACGATAGATGTTGGTCCTCCTTCTCGAGAAGGAGGACCAACATCTATCG-3'

Other clones with same target sequence:

  1. TRCN0000302448