Construct: shRNA TRCN0000124644

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_021534.2-796s1c1
DNA Barcode:
GCCTGCCTTCTCAAAGTCATA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Pxmp4 (59038)
Gene Description:
peroxisomal membrane protein 4
Transcript:
RefSeq NM_021534.2 (NON-CURRENT)
Match location:
Position 796 (3UTR)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000124644)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCCTGCCTTCTCAAAGTCATA
Hairpin Sequence:
5'-CCGG-GCCTGCCTTCTCAAAGTCATA-CTCGAG-TATGACTTTGAGAAGGCAGGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCCTGCCTTCTCAAAGTCATACTCGAGTATGACTTTGAGAAGGCAGGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCCTGCCTTCTCAAAGTCATACTCGAGTATGACTTTGAGAAGGCAGGC-3'

Other clones with same target sequence:

(none)