Construct: shRNA TRCN0000125830
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_175533.2-1423s1c1
- DNA Barcode:
- GACTGCGAAGAAGAAGGTAAA
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- 5830411N06Rik (244234)
- Gene Description:
- RIKEN cDNA 5830411N06 gene
- Transcript:
- RefSeq NM_175533.2 (NON-CURRENT)
- Match location:
- Position 1423 (3UTR)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000125830)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- GACTGCGAAGAAGAAGGTAAA
- Hairpin Sequence:
-
5'-CCGG-GACTGCGAAGAAGAAGGTAAA-CTCGAG-TTTACCTTCTTCTTCGCAGTC-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGGACTGCGAAGAAGAAGGTAAACTCGAGTTTACCTTCTTCTTCGCAGTCTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAGACTGCGAAGAAGAAGGTAAACTCGAGTTTACCTTCTTCTTCGCAGTC-3'
Other clones with same target sequence:
(none)
