Construct: shRNA TRCN0000126009

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_025932.1-1373s1c1
DNA Barcode:
GCCTCTTAAATGAACAGCTAT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Syap1 (67043)
Gene Description:
synapse associated protein 1
Transcript:
RefSeq NM_025932.1 (NON-CURRENT)
Match location:
Position 1373 (3UTR)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000126009)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCCTCTTAAATGAACAGCTAT
Hairpin Sequence:
5'-CCGG-GCCTCTTAAATGAACAGCTAT-CTCGAG-ATAGCTGTTCATTTAAGAGGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCCTCTTAAATGAACAGCTATCTCGAGATAGCTGTTCATTTAAGAGGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCCTCTTAAATGAACAGCTATCTCGAGATAGCTGTTCATTTAAGAGGC-3'

Other clones with same target sequence:

(none)