Construct: shRNA TRCN0000127339
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_178390.2-1554s1c1
- DNA Barcode:
- CCTGACCAGTGGAAATAACTT
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Fam53a (74504)
- Gene Description:
- family with sequence similarity 53, member A
- Transcript:
- RefSeq NM_178390.2 (NON-CURRENT)
- Match location:
- Position 1554 (3UTR)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000127339)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CCTGACCAGTGGAAATAACTT
- Hairpin Sequence:
-
5'-CCGG-CCTGACCAGTGGAAATAACTT-CTCGAG-AAGTTATTTCCACTGGTCAGG-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCCTGACCAGTGGAAATAACTTCTCGAGAAGTTATTTCCACTGGTCAGGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACCTGACCAGTGGAAATAACTTCTCGAGAAGTTATTTCCACTGGTCAGG-3'
Other clones with same target sequence:
(none)
