Construct: shRNA TRCN0000128277

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_052952.1-489s1c1
DNA Barcode:
GATCAACTTTCTTCTAGGTCT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
DIRC1 (116093)
Gene Description:
disrupted in renal carcinoma 1
Transcript:
RefSeq NM_052952.1 (NON-CURRENT)
Match location:
Position 489 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000128277)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GATCAACTTTCTTCTAGGTCT
Hairpin Sequence:
5'-CCGG-GATCAACTTTCTTCTAGGTCT-CTCGAG-AGACCTAGAAGAAAGTTGATC-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGATCAACTTTCTTCTAGGTCTCTCGAGAGACCTAGAAGAAAGTTGATCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGATCAACTTTCTTCTAGGTCTCTCGAGAGACCTAGAAGAAAGTTGATC-3'

Other clones with same target sequence:

(none)