Construct: shRNA TRCN0000130588
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_014837.3-670s1c1
- DNA Barcode:
- CCTCCAATGGTCAGCCTTATA
Original Target:
- Taxon:
-
Homo sapiens (human)
- Gene:
- SMG7 (9887)
- Gene Description:
- SMG7 nonsense mediated mRNA decay factor
- Transcript:
- RefSeq NM_014837.3 (NON-CURRENT)
- Match location:
- Position 670 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000130588)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CCTCCAATGGTCAGCCTTATA
- Hairpin Sequence:
-
5'-CCGG-CCTCCAATGGTCAGCCTTATA-CTCGAG-TATAAGGCTGACCATTGGAGG-TTTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCCTCCAATGGTCAGCCTTATACTCGAGTATAAGGCTGACCATTGGAGGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACCTCCAATGGTCAGCCTTATACTCGAGTATAAGGCTGACCATTGGAGG-3'
Other clones with same target sequence:
-
TRCN0000292265
