Construct: shRNA TRCN0000131001

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_015914.5-986s1c1
DNA Barcode:
CCTGAACTACACAGCTGAGAA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
TXNDC11 (51061)
Gene Description:
thioredoxin domain containing 11
Transcript:
RefSeq NM_015914.5 (NON-CURRENT)
Match location:
Position 986 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000131001)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCTGAACTACACAGCTGAGAA
Hairpin Sequence:
5'-CCGG-CCTGAACTACACAGCTGAGAA-CTCGAG-TTCTCAGCTGTGTAGTTCAGG-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCTGAACTACACAGCTGAGAACTCGAGTTCTCAGCTGTGTAGTTCAGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCTGAACTACACAGCTGAGAACTCGAGTTCTCAGCTGTGTAGTTCAGG-3'

Other clones with same target sequence:

  1. TRCN0000336724