Construct: shRNA TRCN0000136383

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_138348.3-1176s1c1
DNA Barcode:
CCCTTTAGTAGTAACGGGTTT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
OTULIN (90268)
Gene Description:
OTU deubiquitinase with linear linkage specificity
Transcript:
RefSeq NM_138348.3 (NON-CURRENT)
Match location:
Position 1176 (3UTR)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000136383)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCCTTTAGTAGTAACGGGTTT
Hairpin Sequence:
5'-CCGG-CCCTTTAGTAGTAACGGGTTT-CTCGAG-AAACCCGTTACTACTAAAGGG-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCCTTTAGTAGTAACGGGTTTCTCGAGAAACCCGTTACTACTAAAGGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCCTTTAGTAGTAACGGGTTTCTCGAGAAACCCGTTACTACTAAAGGG-3'

Other clones with same target sequence:

(none)