Construct: shRNA TRCN0000139077

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_018373.1-577s1c1
DNA Barcode:
CCTGCTATTCTGCCATGTCTT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
SYNJ2BP (55333)
Gene Description:
synaptojanin 2 binding protein
Transcript:
RefSeq NM_018373.1 (NON-CURRENT)
Match location:
Position 577 (3UTR)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000139077)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCTGCTATTCTGCCATGTCTT
Hairpin Sequence:
5'-CCGG-CCTGCTATTCTGCCATGTCTT-CTCGAG-AAGACATGGCAGAATAGCAGG-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCTGCTATTCTGCCATGTCTTCTCGAGAAGACATGGCAGAATAGCAGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCTGCTATTCTGCCATGTCTTCTCGAGAAGACATGGCAGAATAGCAGG-3'

Other clones with same target sequence:

(none)