Construct: shRNA TRCN0000139410

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_015129.4-889s1c1
DNA Barcode:
CGGAGTCCAGATCTATCAGTT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
SEPTIN6 (23157)
Gene Description:
septin 6
Transcript:
RefSeq NM_015129.4 (NON-CURRENT)
Match location:
Position 889 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000139410)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CGGAGTCCAGATCTATCAGTT
Hairpin Sequence:
5'-CCGG-CGGAGTCCAGATCTATCAGTT-CTCGAG-AACTGATAGATCTGGACTCCG-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCGGAGTCCAGATCTATCAGTTCTCGAGAACTGATAGATCTGGACTCCGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACGGAGTCCAGATCTATCAGTTCTCGAGAACTGATAGATCTGGACTCCG-3'

Other clones with same target sequence:

  1. TRCN0000278212