Construct: shRNA TRCN0000139847

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_014900.2-3020s1c1
DNA Barcode:
CAAACTCTCCTGAGGAGCTAT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
COBLL1 (22837)
Gene Description:
cordon-bleu WH2 repeat protein like 1
Transcript:
RefSeq NM_014900.2 (NON-CURRENT)
Match location:
Position 3020 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000139847)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CAAACTCTCCTGAGGAGCTAT
Hairpin Sequence:
5'-CCGG-CAAACTCTCCTGAGGAGCTAT-CTCGAG-ATAGCTCCTCAGGAGAGTTTG-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCAAACTCTCCTGAGGAGCTATCTCGAGATAGCTCCTCAGGAGAGTTTGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACAAACTCTCCTGAGGAGCTATCTCGAGATAGCTCCTCAGGAGAGTTTG-3'

Other clones with same target sequence:

(none)