Construct: shRNA TRCN0000139972

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_002532.3-552s1c1
DNA Barcode:
GCTGCATGGTATCCAAGTGAA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
NUP88 (4927)
Gene Description:
nucleoporin 88
Transcript:
RefSeq NM_002532.3 (NON-CURRENT)
Match location:
Position 552 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000139972)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCTGCATGGTATCCAAGTGAA
Hairpin Sequence:
5'-CCGG-GCTGCATGGTATCCAAGTGAA-CTCGAG-TTCACTTGGATACCATGCAGC-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCTGCATGGTATCCAAGTGAACTCGAGTTCACTTGGATACCATGCAGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCTGCATGGTATCCAAGTGAACTCGAGTTCACTTGGATACCATGCAGC-3'

Other clones with same target sequence:

(none)