Construct: shRNA TRCN0000140566

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_198489.1-1017s1c1
DNA Barcode:
GCAGCAATGAAGAAGCAGTCA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
CCDC84 (338657)
Gene Description:
coiled-coil domain containing 84
Transcript:
RefSeq NM_198489.1 (NON-CURRENT)
Match location:
Position 1017 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000140566)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCAGCAATGAAGAAGCAGTCA
Hairpin Sequence:
5'-CCGG-GCAGCAATGAAGAAGCAGTCA-CTCGAG-TGACTGCTTCTTCATTGCTGC-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCAGCAATGAAGAAGCAGTCACTCGAGTGACTGCTTCTTCATTGCTGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCAGCAATGAAGAAGCAGTCACTCGAGTGACTGCTTCTTCATTGCTGC-3'

Other clones with same target sequence:

(none)