Construct: shRNA TRCN0000142256

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_001001693.1-2427s1c1
DNA Barcode:
GAAGTGACAAGTCCAAGTGCA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
LINC00898 (400932)
Gene Description:
long intergenic non-protein coding RNA 898
Transcript:
RefSeq NM_001001693.1 (NON-CURRENT)
Match location:
Position 2427 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000142256)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GAAGTGACAAGTCCAAGTGCA
Hairpin Sequence:
5'-CCGG-GAAGTGACAAGTCCAAGTGCA-CTCGAG-TGCACTTGGACTTGTCACTTC-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGAAGTGACAAGTCCAAGTGCACTCGAGTGCACTTGGACTTGTCACTTCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGAAGTGACAAGTCCAAGTGCACTCGAGTGCACTTGGACTTGTCACTTC-3'

Other clones with same target sequence:

(none)