Construct: shRNA TRCN0000143829

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_004844.1-875s1c1
DNA Barcode:
CCTTTGAAGATGACAGCTGTA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
SH3BP5 (9467)
Gene Description:
SH3 domain binding protein 5
Transcript:
RefSeq NM_004844.1 (NON-CURRENT)
Match location:
Position 875 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000143829)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCTTTGAAGATGACAGCTGTA
Hairpin Sequence:
5'-CCGG-CCTTTGAAGATGACAGCTGTA-CTCGAG-TACAGCTGTCATCTTCAAAGG-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCTTTGAAGATGACAGCTGTACTCGAGTACAGCTGTCATCTTCAAAGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCTTTGAAGATGACAGCTGTACTCGAGTACAGCTGTCATCTTCAAAGG-3'

Other clones with same target sequence:

(none)