Construct: shRNA TRCN0000143905

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_017432.2-1202s1c1
DNA Barcode:
CCTGTACTCTTCAGAGAAGAA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
PTOV1 (53635)
Gene Description:
PTOV1 extended AT-hook containing adaptor protein
Transcript:
RefSeq NM_017432.2 (NON-CURRENT)
Match location:
Position 1202 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000143905)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCTGTACTCTTCAGAGAAGAA
Hairpin Sequence:
5'-CCGG-CCTGTACTCTTCAGAGAAGAA-CTCGAG-TTCTTCTCTGAAGAGTACAGG-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCTGTACTCTTCAGAGAAGAACTCGAGTTCTTCTCTGAAGAGTACAGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCTGTACTCTTCAGAGAAGAACTCGAGTTCTTCTCTGAAGAGTACAGG-3'

Other clones with same target sequence:

  1. TRCN0000281092