Construct: shRNA TRCN0000144423

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_021259.1-1980s1c1
DNA Barcode:
CTGAAATACGTGCTGTTTCTT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
PGAP6 (58986)
Gene Description:
post-glycosylphosphatidylinositol attachment to proteins 6
Transcript:
RefSeq NM_021259.1 (NON-CURRENT)
Match location:
Position 1980 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000144423)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CTGAAATACGTGCTGTTTCTT
Hairpin Sequence:
5'-CCGG-CTGAAATACGTGCTGTTTCTT-CTCGAG-AAGAAACAGCACGTATTTCAG-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCTGAAATACGTGCTGTTTCTTCTCGAGAAGAAACAGCACGTATTTCAGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACTGAAATACGTGCTGTTTCTTCTCGAGAAGAAACAGCACGTATTTCAG-3'

Other clones with same target sequence:

(none)