Construct: shRNA TRCN0000146723

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_198529.1-3805s1c1
DNA Barcode:
CCTTTCAGTTTGAGCTTTGTA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
EFCAB5 (374786)
Gene Description:
EF-hand calcium binding domain 5
Transcript:
RefSeq NM_198529.1 (NON-CURRENT)
Match location:
Position 3805 (3UTR)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000146723)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCTTTCAGTTTGAGCTTTGTA
Hairpin Sequence:
5'-CCGG-CCTTTCAGTTTGAGCTTTGTA-CTCGAG-TACAAAGCTCAAACTGAAAGG-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCTTTCAGTTTGAGCTTTGTACTCGAGTACAAAGCTCAAACTGAAAGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCTTTCAGTTTGAGCTTTGTACTCGAGTACAAAGCTCAAACTGAAAGG-3'

Other clones with same target sequence:

(none)