Construct: shRNA TRCN0000149280
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_152582.3-681s1c1
- DNA Barcode:
- GAAATGCTTGAAGGAGTGCAA
Original Target:
- Taxon:
-
Homo sapiens (human)
- Gene:
- CT45-2 (158852)
- Gene Description:
- cancer/testis antigen CT45-2
- Transcript:
- RefSeq NM_152582.3 (NON-CURRENT)
- Match location:
- Position 681 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000149280)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- GAAATGCTTGAAGGAGTGCAA
- Hairpin Sequence:
-
5'-CCGG-GAAATGCTTGAAGGAGTGCAA-CTCGAG-TTGCACTCCTTCAAGCATTTC-TTTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGGAAATGCTTGAAGGAGTGCAACTCGAGTTGCACTCCTTCAAGCATTTCTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAGAAATGCTTGAAGGAGTGCAACTCGAGTTGCACTCCTTCAAGCATTTC-3'
Other clones with same target sequence:
-
TRCN0000161235
-
TRCN0000142598
