Construct: shRNA TRCN0000149623

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_003178.3-1077s1c1
DNA Barcode:
GCCTTTCATTGACTCCAAGTA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
SYN2 (6854)
Gene Description:
synapsin II
Transcript:
RefSeq NM_003178.3 (NON-CURRENT)
Match location:
Position 1077 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000149623)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCCTTTCATTGACTCCAAGTA
Hairpin Sequence:
5'-CCGG-GCCTTTCATTGACTCCAAGTA-CTCGAG-TACTTGGAGTCAATGAAAGGC-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCCTTTCATTGACTCCAAGTACTCGAGTACTTGGAGTCAATGAAAGGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCCTTTCATTGACTCCAAGTACTCGAGTACTTGGAGTCAATGAAAGGC-3'

Other clones with same target sequence:

(none)