Construct: shRNA TRCN0000150036

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_173630.2-5388s1c1
DNA Barcode:
CGATTGATATGTTCTGCACAT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
RTTN (25914)
Gene Description:
rotatin
Transcript:
RefSeq NM_173630.2 (NON-CURRENT)
Match location:
Position 5388 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000150036)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CGATTGATATGTTCTGCACAT
Hairpin Sequence:
5'-CCGG-CGATTGATATGTTCTGCACAT-CTCGAG-ATGTGCAGAACATATCAATCG-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCGATTGATATGTTCTGCACATCTCGAGATGTGCAGAACATATCAATCGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACGATTGATATGTTCTGCACATCTCGAGATGTGCAGAACATATCAATCG-3'

Other clones with same target sequence:

(none)