Construct: shRNA TRCN0000155651
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_025065.5-199s1c1
- DNA Barcode:
- CTTAATGTTCACGCGGTGGAA
Original Target:
- Taxon:
-
Homo sapiens (human)
- Gene:
- RPF1 (80135)
- Gene Description:
- ribosome production factor 1 homolog
- Transcript:
- RefSeq NM_025065.5 (NON-CURRENT)
- Match location:
- Position 199 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000155651)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CTTAATGTTCACGCGGTGGAA
- Hairpin Sequence:
-
5'-CCGG-CTTAATGTTCACGCGGTGGAA-CTCGAG-TTCCACCGCGTGAACATTAAG-TTTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCTTAATGTTCACGCGGTGGAACTCGAGTTCCACCGCGTGAACATTAAGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACTTAATGTTCACGCGGTGGAACTCGAGTTCCACCGCGTGAACATTAAG-3'
Other clones with same target sequence:
-
TRCN0000292198
