Construct: shRNA TRCN0000157004

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_020433.3-2106s1c1
DNA Barcode:
GTCCAACATTGCTCGCACTTT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
JPH2 (57158)
Gene Description:
junctophilin 2
Transcript:
RefSeq NM_020433.3 (NON-CURRENT)
Match location:
Position 2106 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000157004)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GTCCAACATTGCTCGCACTTT
Hairpin Sequence:
5'-CCGG-GTCCAACATTGCTCGCACTTT-CTCGAG-AAAGTGCGAGCAATGTTGGAC-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGTCCAACATTGCTCGCACTTTCTCGAGAAAGTGCGAGCAATGTTGGACTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGTCCAACATTGCTCGCACTTTCTCGAGAAAGTGCGAGCAATGTTGGAC-3'

Other clones with same target sequence:

(none)