Construct: shRNA TRCN0000158454

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_031915.1-1585s1c1
DNA Barcode:
CCCATTTCTTTCTGTAATGAA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
SETDB2 (83852)
Gene Description:
SET domain bifurcated histone lysine methyltransferase 2
Transcript:
RefSeq NM_031915.1 (NON-CURRENT)
Match location:
Position 1585 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000158454)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCCATTTCTTTCTGTAATGAA
Hairpin Sequence:
5'-CCGG-CCCATTTCTTTCTGTAATGAA-CTCGAG-TTCATTACAGAAAGAAATGGG-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCCATTTCTTTCTGTAATGAACTCGAGTTCATTACAGAAAGAAATGGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCCATTTCTTTCTGTAATGAACTCGAGTTCATTACAGAAAGAAATGGG-3'

Other clones with same target sequence:

(none)