Construct: shRNA TRCN0000159125
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_001007551.1-627s1c1
- DNA Barcode:
- GCACCTTAAGAAGAAACTGAA
Original Target:
- Taxon:
-
Homo sapiens (human)
- Gene:
- CT45A5 (441521)
- Gene Description:
- cancer/testis antigen family 45 member A5
- Transcript:
- RefSeq NM_001007551.1 (NON-CURRENT)
- Match location:
- Position 627 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000159125)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- GCACCTTAAGAAGAAACTGAA
- Hairpin Sequence:
-
5'-CCGG-GCACCTTAAGAAGAAACTGAA-CTCGAG-TTCAGTTTCTTCTTAAGGTGC-TTTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGGCACCTTAAGAAGAAACTGAACTCGAGTTCAGTTTCTTCTTAAGGTGCTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAGCACCTTAAGAAGAAACTGAACTCGAGTTCAGTTTCTTCTTAAGGTGC-3'
Other clones with same target sequence:
-
TRCN0000145563
