Construct: shRNA TRCN0000160272

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_024713.1-688s1c1
DNA Barcode:
CCAATTGTTTACAGGAAGAAA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
KATNBL1 (79768)
Gene Description:
katanin regulatory subunit B1 like 1
Transcript:
RefSeq NM_024713.1 (NON-CURRENT)
Match location:
Position 688 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000160272)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCAATTGTTTACAGGAAGAAA
Hairpin Sequence:
5'-CCGG-CCAATTGTTTACAGGAAGAAA-CTCGAG-TTTCTTCCTGTAAACAATTGG-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCAATTGTTTACAGGAAGAAACTCGAGTTTCTTCCTGTAAACAATTGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCAATTGTTTACAGGAAGAAACTCGAGTTTCTTCCTGTAAACAATTGG-3'

Other clones with same target sequence:

(none)