Construct: shRNA TRCN0000162297

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_004319.1-6915s1c1
DNA Barcode:
CCGGTATTCAACCTTGAGTTT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
ASTN1 (460)
Gene Description:
astrotactin 1
Transcript:
RefSeq NM_004319.1 (NON-CURRENT)
Match location:
Position 6915 (3UTR)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000162297)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCGGTATTCAACCTTGAGTTT
Hairpin Sequence:
5'-CCGG-CCGGTATTCAACCTTGAGTTT-CTCGAG-AAACTCAAGGTTGAATACCGG-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCGGTATTCAACCTTGAGTTTCTCGAGAAACTCAAGGTTGAATACCGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCGGTATTCAACCTTGAGTTTCTCGAGAAACTCAAGGTTGAATACCGG-3'

Other clones with same target sequence:

(none)