Construct: shRNA TRCN0000162498

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_052942.2-1995s1c1
DNA Barcode:
CAAGTGAAAGCAGAAGCTGAA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
GBP5 (115362)
Gene Description:
guanylate binding protein 5
Transcript:
RefSeq NM_052942.2 (NON-CURRENT)
Match location:
Position 1995 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000162498)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CAAGTGAAAGCAGAAGCTGAA
Hairpin Sequence:
5'-CCGG-CAAGTGAAAGCAGAAGCTGAA-CTCGAG-TTCAGCTTCTGCTTTCACTTG-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCAAGTGAAAGCAGAAGCTGAACTCGAGTTCAGCTTCTGCTTTCACTTGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACAAGTGAAAGCAGAAGCTGAACTCGAGTTCAGCTTCTGCTTTCACTTG-3'

Other clones with same target sequence:

(none)