Construct: shRNA TRCN0000164271

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_207497.1-335s1c1
DNA Barcode:
CCTTAGTGAGACAAGGTTTCA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
LINC00336 (401253)
Gene Description:
long intergenic non-protein coding RNA 336
Transcript:
RefSeq NM_207497.1 (NON-CURRENT)
Match location:
Position 335 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000164271)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCTTAGTGAGACAAGGTTTCA
Hairpin Sequence:
5'-CCGG-CCTTAGTGAGACAAGGTTTCA-CTCGAG-TGAAACCTTGTCTCACTAAGG-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCTTAGTGAGACAAGGTTTCACTCGAGTGAAACCTTGTCTCACTAAGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCTTAGTGAGACAAGGTTTCACTCGAGTGAAACCTTGTCTCACTAAGG-3'

Other clones with same target sequence:

(none)