Construct: shRNA TRCN0000164729
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_207511.1-3261s1c1
- DNA Barcode:
- CCAAGGTGAAATCTGCCTCTT
Original Target:
- Taxon:
-
Homo sapiens (human)
- Gene:
- C9orf139 (401563)
- Gene Description:
- chromosome 9 open reading frame 139
- Transcript:
- RefSeq NM_207511.1 (NON-CURRENT)
- Match location:
- Position 3261 (3UTR)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000164729)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CCAAGGTGAAATCTGCCTCTT
- Hairpin Sequence:
-
5'-CCGG-CCAAGGTGAAATCTGCCTCTT-CTCGAG-AAGAGGCAGATTTCACCTTGG-TTTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCCAAGGTGAAATCTGCCTCTTCTCGAGAAGAGGCAGATTTCACCTTGGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACCAAGGTGAAATCTGCCTCTTCTCGAGAAGAGGCAGATTTCACCTTGG-3'
Other clones with same target sequence:
(none)
