Construct: shRNA TRCN0000165230

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_001004336.1-1551s1c1
DNA Barcode:
GCAGTGGCTTACACCTGTAAT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
BAIAP2-DT (440465)
Gene Description:
BAIAP2 divergent transcript
Transcript:
RefSeq NM_001004336.1 (NON-CURRENT)
Match location:
Position 1551 (3UTR)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000165230)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCAGTGGCTTACACCTGTAAT
Hairpin Sequence:
5'-CCGG-GCAGTGGCTTACACCTGTAAT-CTCGAG-ATTACAGGTGTAAGCCACTGC-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCAGTGGCTTACACCTGTAATCTCGAGATTACAGGTGTAAGCCACTGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCAGTGGCTTACACCTGTAATCTCGAGATTACAGGTGTAAGCCACTGC-3'

Other clones with same target sequence:

(none)