Construct: shRNA TRCN0000166006

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_005563.3-545s1c1
DNA Barcode:
GCGAGAGAAGGATAAGCACAT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
STMN1 (3925)
Gene Description:
stathmin 1
Transcript:
RefSeq NM_005563.3 (NON-CURRENT)
Match location:
Position 545 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000166006)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCGAGAGAAGGATAAGCACAT
Hairpin Sequence:
5'-CCGG-GCGAGAGAAGGATAAGCACAT-CTCGAG-ATGTGCTTATCCTTCTCTCGC-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCGAGAGAAGGATAAGCACATCTCGAGATGTGCTTATCCTTCTCTCGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCGAGAGAAGGATAAGCACATCTCGAGATGTGCTTATCCTTCTCTCGC-3'

Other clones with same target sequence:

  1. TRCN0000281370