Construct: shRNA TRCN0000166781

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_021820.1-539s1c1
DNA Barcode:
CCAAACTGCATCCCTGAGAAT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
TRMT11 (60487)
Gene Description:
tRNA methyltransferase 11 homolog
Transcript:
RefSeq NM_021820.1 (NON-CURRENT)
Match location:
Position 539 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000166781)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCAAACTGCATCCCTGAGAAT
Hairpin Sequence:
5'-CCGG-CCAAACTGCATCCCTGAGAAT-CTCGAG-ATTCTCAGGGATGCAGTTTGG-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCAAACTGCATCCCTGAGAATCTCGAGATTCTCAGGGATGCAGTTTGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCAAACTGCATCCCTGAGAATCTCGAGATTCTCAGGGATGCAGTTTGG-3'

Other clones with same target sequence:

(none)