Construct: shRNA TRCN0000167113

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_033111.2-1943s1c1
DNA Barcode:
CCAGAAATATTGACAGACAAA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
LOC88523 (88523)
Gene Description:
CG016
Transcript:
RefSeq NM_033111.2 (NON-CURRENT)
Match location:
Position 1943 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000167113)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCAGAAATATTGACAGACAAA
Hairpin Sequence:
5'-CCGG-CCAGAAATATTGACAGACAAA-CTCGAG-TTTGTCTGTCAATATTTCTGG-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCAGAAATATTGACAGACAAACTCGAGTTTGTCTGTCAATATTTCTGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCAGAAATATTGACAGACAAACTCGAGTTTGTCTGTCAATATTTCTGG-3'

Other clones with same target sequence:

(none)