Construct: shRNA TRCN0000172549

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_015720.1-1036s1c1
DNA Barcode:
GAGACATGGAACTGACACCTT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
PODXL2 (50512)
Gene Description:
podocalyxin like 2
Transcript:
RefSeq NM_015720.1 (NON-CURRENT)
Match location:
Position 1036 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000172549)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GAGACATGGAACTGACACCTT
Hairpin Sequence:
5'-CCGG-GAGACATGGAACTGACACCTT-CTCGAG-AAGGTGTCAGTTCCATGTCTC-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGAGACATGGAACTGACACCTTCTCGAGAAGGTGTCAGTTCCATGTCTCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGAGACATGGAACTGACACCTTCTCGAGAAGGTGTCAGTTCCATGTCTC-3'

Other clones with same target sequence:

(none)