Construct: shRNA TRCN0000172812
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_080829.1-420s1c1
- DNA Barcode:
- GAGGATCGCAAAGTCCATCAA
Original Target:
- Taxon:
-
Homo sapiens (human)
- Gene:
- RIPOR3 (140876)
- Gene Description:
- RIPOR family member 3
- Transcript:
- RefSeq NM_080829.1 (NON-CURRENT)
- Match location:
- Position 420 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000172812)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- GAGGATCGCAAAGTCCATCAA
- Hairpin Sequence:
-
5'-CCGG-GAGGATCGCAAAGTCCATCAA-CTCGAG-TTGATGGACTTTGCGATCCTC-TTTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGGAGGATCGCAAAGTCCATCAACTCGAGTTGATGGACTTTGCGATCCTCTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAGAGGATCGCAAAGTCCATCAACTCGAGTTGATGGACTTTGCGATCCTC-3'
Other clones with same target sequence:
(none)
