Construct: shRNA TRCN0000175789

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_029018.2-723s1c1
DNA Barcode:
GTTCTGCTTTATCTCCCATTT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Cd200r3 (74603)
Gene Description:
CD200 receptor 3
Transcript:
RefSeq NM_029018.2 (NON-CURRENT)
Match location:
Position 723 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000175789)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GTTCTGCTTTATCTCCCATTT
Hairpin Sequence:
5'-CCGG-GTTCTGCTTTATCTCCCATTT-CTCGAG-AAATGGGAGATAAAGCAGAAC-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGTTCTGCTTTATCTCCCATTTCTCGAGAAATGGGAGATAAAGCAGAACTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGTTCTGCTTTATCTCCCATTTCTCGAGAAATGGGAGATAAAGCAGAAC-3'

Other clones with same target sequence:

(none)