Construct: shRNA TRCN0000176315
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_198161.1-1908s1c1
- DNA Barcode:
- CTAGCTCAAAGCTAGACCATT
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Bhlhb9 (70237)
- Gene Description:
- basic helix-loop-helix domain containing, class B9
- Transcript:
- RefSeq NM_198161.1 (NON-CURRENT)
- Match location:
- Position 1908 (3UTR)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000176315)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CTAGCTCAAAGCTAGACCATT
- Hairpin Sequence:
-
5'-CCGG-CTAGCTCAAAGCTAGACCATT-CTCGAG-AATGGTCTAGCTTTGAGCTAG-TTTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCTAGCTCAAAGCTAGACCATTCTCGAGAATGGTCTAGCTTTGAGCTAGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACTAGCTCAAAGCTAGACCATTCTCGAGAATGGTCTAGCTTTGAGCTAG-3'
Other clones with same target sequence:
(none)
