Construct: shRNA TRCN0000178851

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_018198.1-1363s1c1
DNA Barcode:
CGAAGGATAATTGAGGCAGAA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
DNAJC11 (55735)
Gene Description:
DnaJ heat shock protein family (Hsp40) member C11
Transcript:
RefSeq NM_018198.1 (NON-CURRENT)
Match location:
Position 1363 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000178851)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CGAAGGATAATTGAGGCAGAA
Hairpin Sequence:
5'-CCGG-CGAAGGATAATTGAGGCAGAA-CTCGAG-TTCTGCCTCAATTATCCTTCG-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCGAAGGATAATTGAGGCAGAACTCGAGTTCTGCCTCAATTATCCTTCGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACGAAGGATAATTGAGGCAGAACTCGAGTTCTGCCTCAATTATCCTTCG-3'

Other clones with same target sequence:

(none)