Construct: shRNA TRCN0000179324

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_175267.2-498s1c1
DNA Barcode:
GCCTTGATAACGTCTCATACA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Six3os1 (77868)
Gene Description:
Six3 opposite strand transcript 1
Transcript:
RefSeq NM_175267.2 (NON-CURRENT)
Match location:
Position 498 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000179324)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCCTTGATAACGTCTCATACA
Hairpin Sequence:
5'-CCGG-GCCTTGATAACGTCTCATACA-CTCGAG-TGTATGAGACGTTATCAAGGC-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCCTTGATAACGTCTCATACACTCGAGTGTATGAGACGTTATCAAGGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCCTTGATAACGTCTCATACACTCGAGTGTATGAGACGTTATCAAGGC-3'

Other clones with same target sequence:

(none)