Construct: shRNA TRCN0000180817
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_015009.1-986s1c1
- DNA Barcode:
- GCCTGCAAATTCATGACAGGA
Original Target:
- Taxon:
-
Homo sapiens (human)
- Gene:
- PDZRN3 (23024)
- Gene Description:
- PDZ domain containing ring finger 3
- Transcript:
- RefSeq NM_015009.1 (NON-CURRENT)
- Match location:
- Position 986 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000180817)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- GCCTGCAAATTCATGACAGGA
- Hairpin Sequence:
-
5'-CCGG-GCCTGCAAATTCATGACAGGA-CTCGAG-TCCTGTCATGAATTTGCAGGC-TTTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGGCCTGCAAATTCATGACAGGACTCGAGTCCTGTCATGAATTTGCAGGCTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAGCCTGCAAATTCATGACAGGACTCGAGTCCTGTCATGAATTTGCAGGC-3'
Other clones with same target sequence:
(none)
