Construct: shRNA TRCN0000181250

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_145616.2-1662s1c1
DNA Barcode:
CCTTAAATTCAGGGAGACCAA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Lrrc49 (102747)
Gene Description:
leucine rich repeat containing 49
Transcript:
RefSeq NM_145616.2 (NON-CURRENT)
Match location:
Position 1662 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000181250)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCTTAAATTCAGGGAGACCAA
Hairpin Sequence:
5'-CCGG-CCTTAAATTCAGGGAGACCAA-CTCGAG-TTGGTCTCCCTGAATTTAAGG-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCTTAAATTCAGGGAGACCAACTCGAGTTGGTCTCCCTGAATTTAAGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCTTAAATTCAGGGAGACCAACTCGAGTTGGTCTCCCTGAATTTAAGG-3'

Other clones with same target sequence:

(none)