Construct: shRNA TRCN0000182946

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_207162.1-1002s1c1
DNA Barcode:
CCAATTCTACTGTGTACTTTA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Gm20738 (382133)
Gene Description:
predicted gene, 20738
Transcript:
RefSeq NM_207162.1 (NON-CURRENT)
Match location:
Position 1002 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000182946)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCAATTCTACTGTGTACTTTA
Hairpin Sequence:
5'-CCGG-CCAATTCTACTGTGTACTTTA-CTCGAG-TAAAGTACACAGTAGAATTGG-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCAATTCTACTGTGTACTTTACTCGAGTAAAGTACACAGTAGAATTGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCAATTCTACTGTGTACTTTACTCGAGTAAAGTACACAGTAGAATTGG-3'

Other clones with same target sequence:

(none)