Construct: shRNA TRCN0000185974
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- XM_484705.1-765s1c1
- DNA Barcode:
- GCCAAATAACTTGAACTCAAT
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Dsg1a (13510)
- Gene Description:
- desmoglein 1 alpha
- Transcript:
- RefSeq XM_484705.1 (NON-CURRENT)
- Match location:
- Position 765 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000185974)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- GCCAAATAACTTGAACTCAAT
- Hairpin Sequence:
-
5'-CCGG-GCCAAATAACTTGAACTCAAT-CTCGAG-ATTGAGTTCAAGTTATTTGGC-TTTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGGCCAAATAACTTGAACTCAATCTCGAGATTGAGTTCAAGTTATTTGGCTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAGCCAAATAACTTGAACTCAATCTCGAGATTGAGTTCAAGTTATTTGGC-3'
Other clones with same target sequence:
-
TRCN0000094311
