Construct: shRNA TRCN0000194364

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_198416.1-2537s1c1
DNA Barcode:
CAGGCAGAACACCTAACTTAT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Zzz3 (108946)
Gene Description:
zinc finger, ZZ domain containing 3
Transcript:
RefSeq NM_198416.1 (NON-CURRENT)
Match location:
Position 2537 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000194364)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CAGGCAGAACACCTAACTTAT
Hairpin Sequence:
5'-CCGG-CAGGCAGAACACCTAACTTAT-CTCGAG-ATAAGTTAGGTGTTCTGCCTG-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCAGGCAGAACACCTAACTTATCTCGAGATAAGTTAGGTGTTCTGCCTGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACAGGCAGAACACCTAACTTATCTCGAGATAAGTTAGGTGTTCTGCCTG-3'

Other clones with same target sequence:

  1. TRCN0000353323