Construct: shRNA TRCN0000194477

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_178791.2-1591s1c1
DNA Barcode:
GCCACTTATGATGACATCCAT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Vstm4 (320736)
Gene Description:
V-set and transmembrane domain containing 4
Transcript:
RefSeq NM_178791.2 (NON-CURRENT)
Match location:
Position 1591 (3UTR)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000194477)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCCACTTATGATGACATCCAT
Hairpin Sequence:
5'-CCGG-GCCACTTATGATGACATCCAT-CTCGAG-ATGGATGTCATCATAAGTGGC-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCCACTTATGATGACATCCATCTCGAGATGGATGTCATCATAAGTGGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCCACTTATGATGACATCCATCTCGAGATGGATGTCATCATAAGTGGC-3'

Other clones with same target sequence:

(none)